Multiplex Paired-Tag Kits
Catalog
Product | Catalogue # | Platform | Size | List Price | Link |
---|---|---|---|---|---|
Multiplex Paired-Tag | MDP8101 | 10X Chromium | 8 Reactions | $2580 | Order |
Multiplex Paired-Tag | MDP16101 | 10X Chromium | 16 Reactions | $4280 | Order |
ℹ️ Need help choosing? Compare our kits
Safety Data Sheets (SDS)
The following Safety Data Sheets apply to these products:- CR1007 Epigenome Technologies Quench Buffer
- CR1001 Epigenome Technologies Incubation Buffer
- CR1006 Epigenome Technologies Activator
- CF1003 Epigenome Technologies Permeabilizer
- CF1005 Epigenome Technologies Stabilizer Buffer
- CF1004 Epigenome Technologies RNAse Inhibitor
- CF1009.1 Epigenome Technologies Prepared TAG Enzyme
- CF1009.2 Epigenome Technologies Prepared TAG Enzyme
- CF1009.3 Epigenome Technologies Prepared TAG Enzyme
- CF1009.4 Epigenome Technologies Prepared TAG Enzyme
Increased Cell Throughput via Multiplexing

Multiplex Droplet Paired-Tag builds on our standard Droplet Paired-Tag technology by using uniquely barcoded oligos during tagmentation. This innovation lets you combine multiple assays within a single 10x Chromium® lane—dramatically boosting throughput without sacrificing data quality. By pooling up to four assays in one run, researchers can capture as many as 30,000 nuclei total (approximately 7,500 per assay), making it an ideal choice for labs that need to profile multiple conditions, marks, or time points efficiently.
What You Need to Get Started
- Antibody: Validated primary antibody for target of interest
- Single-Cell Platform: 10x Genomics Chromium
- Reagents: 10x Genomics Multiome Kit
- Sequencing: Illumina-compatible sequencing system
Advantages of Multiplex Paired-Tag

- ✅ Multi-Condition Profiling: Run up to four assays in parallel
- ✅ Cost Savings: Reduce per-assay sequencing and reagent costs
- ✅ Preserved Data Quality: Barcoded oligos ensure accuracy
- ✅ Flexible Applications: Ideal for disease research, drug screening, and time-course studies
Performance & Data

- 📊 Throughput & Coverage: Multiplex Paired-Tag captures thousands of cells per run with high UMI counts. Tissue data from human brain and PBMC show robust DNA and RNA readouts, with broad histone marks reaching 5000+ UMIs per cell.
- 🧪 Versatility: Compatible with fresh, frozen, and cryopreserved samples, supporting histone PTMs, chromatin remodelers, and transcription factors.
- 🎯Robustness: Strong correlation between bulk and single-cell profiling ensures high reproducibility and confidence in results.
Get Started
We offer 8-Reaction and 16-Reaction Multiplex Droplet Paired-Tag Kits, each fully compatible with 10x Chromium® droplet platforms. Every kit provides uniquely barcoded tagmentation reagents, optimized protocols, and comprehensive support for setup and data analysis. By pooling multiple assays into one droplet lane, you reduce overhead, accelerate your experimental timeline, and maximize the insights gained from each run.
- 📦 Order Now: Select your preferred throughput Multiplex kit!
- 📖 Read the Protocol:Download Protocol
- 💡 Need Help? Contact Support
- 🚀 Accelerate your research with Multiplex Paired-Tag!

Multiplex Paired-Tag: 16 Reaction Kit. Ideal for moderate-volume labs or pilot multiplex studies, enabling runs with up to four assays per lane.

Multiplex Paired-Tag: 32 Reaction Kit. Perfect for larger projects that require multiple conditions or marks in a single run, delivering maximum throughput at scale.
Paired-Tag Services
If you’re new to targeted single-cell epigenetics, we also provide Multiplex Droplet Paired-Tag as a Service — simply send us your samples, and our team will handle everything from assay setup to data delivery. Contact us today to discover how Single-Cell CUT&Tag can shed light on the dynamic chromatin landscapes underlying your research questions.