Custom Profiling Services
Your Epigenetic Vision as Reality - Tailored, Collaborative Assays
Our Customized Services extend beyond our standard single-cell and bulk offerings, opening the door to innovative or highly specialized approaches in epigenetic and multiomic profiling. From multi-target sequential assays to FFPE-focused workflows, we’ll partner with you to design, optimize, and execute custom protocols that address your unique research questions.
| Name | Cat. No | Price |
|---|---|---|
| Single-Cell MultiTag | CSX-MT-001 | Request Quote |
| Single-Cell Paired-MultiTag | CSX-MPT-002 | Request Quote |
| Spatial Paired-Tag | CSX-SPT-003 | Request Quote |
| Custom Service | CSX-CS-009 | Request Quote |
Why Epigenome Technologies?
Protocol Experts: Recognized through high-impact publications and collaborations as pioneers of targeted multi-omics.
Proven Track Record: Hundreds of processed samples of consistently high quality.
Multiple Platforms: Our Single-Cell Services are available for multiple single-cell platforms.
Deep Expertise: Experience with wide variety of tissues and target types, we can ensure your experiment is set up for success.
Ask the Right Question: Go Custom
- Break free from standard kits and off-the-shelf solutions—investigate RNA-bound proteins, DNA damage, or specialized modifications that aren’t covered by traditional pipelines.
- Collaborate with our experienced team to test feasibility, troubleshoot technical hurdles, and refine methods before scaling up.
- We build on our proven single-cell and tagmentation-based workflows, ensuring your custom assay benefits from years of R&D and validated chemistry.
Applications
- Paired Multi-Tag: Profile RNA and multiple target histone modifications, TFs, or chromatin remodelers in a single-cell.
- FFPE/Archival Samples: Adapt CUT&Tag or Paired-Tag protocols for preserved clinical samples, unlocking precious historical data sets.
- Spatial Paired-Tag Combine scCUT&Tag or Paired-Tag with spatial barcodes - retaining single-nucleus resolution with spatial precision.
- Layer on DNA Methylation: Combine histone mark profiling with DNA methylation analysis for a more comprehensive regulatory landscape..
Comprehensive Services Workflow
Consultation & Experimental Design
We review your sample types, target histone marks or TFs, and project goals to ensure the optimal protocol is selected.
Sample Prep & Library Construction
Our highly trained lab technicians handle the full workflow, from nuclei isolation and antibody staining, to single-cell library preparation. Quality control is incorporated into each step to ensure the robust production of ideal libraries. Your libraries can be delivered directly, or sequenced and delivered as sequence reads.
Sequencing & Data Generation
We partner with leading sequencing providers or work with your preferred facility, guaranteeing high-coverage data.
Quality Control & Initial Analysis
Our services include basic quality checks, including demultiplexing, alignment, and preliminary clustering, and QC metric generation, delivering data you can readily explore.
End-to-end Bioinformatics
For labs seeking deeper insights, we offer full downstream analysis—including differential expression, cluster annotation, cis‑regulatory element linking, and integrated RNA+epigenetic visualization—so you can jump straight to biological interpretation.
Deliverables
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Processed fastQ Files Ready for your own pipelines, or integrated with standard tools like CellRanger and provided as Seurat/Scanpy objects.
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Quality Control Reports Overview of library complexity, tagmentation quality, saturation, and cell recovery.
- Optional Bioinformatics Support Additional analysis or custom data visualization can be arranged upon request.